The transcriptome is comprised of all RNA molecules including mRNA, rRNA, tRNA, and other non-coding RNA transcribed in one cell or a population of cells. IntegraGen Genomics is a leading expert in the study of the transcriptome and the measure of RNA expression.


RNA-Seq uses deep-sequencing technologies for transcriptome profiling that provides more precise measurement of levels of transcripts and their isoforms than other methods. IntegraGen is an expert with RNA-Seq and can assist researchers to design and implement a wide variety of RNA-Seq related studies.

  •  Experience across a full range of RNA-Seq study types
  •  We also offer clinical grade RNA-Seq for personalized medicine studies
  •  Cutting-edge, constantly updated bioinformatic pipelines
  •  We can provide you with advice on experimental design
  •  Support from study design through tertiary biostatistical analysis via our GeCo Advanced Genomic Consulting Service



Small RNA Sequencing

IntegraGen has developed and streamlined a process for measuring small RNA expression in tissue samples and liquid biopsies (serum or plasma) via next generation sequencing. We offer researchers a small RNA sequencing service for examining gene regulation at both the transcriptional and post-transcriptional level.


  •  Fully optimized process – from extraction to bioinformatics
  •  Start with either frozen or FFPE tissue, circulating blood cells, or liquid biopsies
  •  Able to extract total RNA from either plasma or serum
  •  Library prep uses random adapters via in-house developed protocol
    •  Reduces bias representation
    •  Provides better correlation
  •  State-of-the-art analysis using snRNAbench mutational signatures



Bioinformatic analyses

IntegraGen assists researchers to overcome RNA-Seq related bioinformatics challenges through the development of efficient methods to extract the relevant information from large amounts of data.

  •  Identification of differentially expressed genes and pathways
  •  de novo event discovery
    •  Fusion
    •  Splice variants
    •  Long non-coding RNA

GeCo Genomics project plan and results (English)

Bulle BD